PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G14130.1   xyloglucan endotransglucosylase/hydrolase 15
Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23730.1 11Arabidopsis thaliana028486958 (8)S
AT5G57550.1 11Arabidopsis thaliana2E-13027463773 (1)S
AT4G25810.1 11Arabidopsis thaliana2E-12928163750 (0)S
Os06g48200.1 7Oryza sativa1E-12727162760 (0)S
Os06g48160.1 7Oryza sativa1E-12628960713 (3)S
Os06g48180.1 7Oryza sativa7E-11928355710 (0)S
v1_GRMZM2G166944_P01 4a53Zea mays2E-12427161750 (0)S
Zm00001eb226490_P002 agpv5Zea mays2E-12427161750 (0)S
GRMZM2G166944_P01 3.21Zea mays2E-12427161750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_16(1) XET_C(1)
TargetP: Secreted (Class 1 C0.003; M0.022; S0.986; _0.106)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 289 aa (-cTP 265)
Molecular Weight 32.69 kDA(-cTP )
PI 9.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help