PPDB

The Plant Proteome Database

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AT4G14110.1   COP9 signalosome%2C subunit CSN8

Lab Annot. COP9 signalosome, subunit CSN8
Mapman: 33.99 development.unspecified
Curated Location
TAIR curated location: signalosome complex & nucleus11019806,8689678
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g34930.1 7Oryza sativa2E-8019757738 (8)_
Os04g34930.3 7Oryza sativa9E-6015557720 (0)M
Os04g34930.2 7Oryza sativa8E-3911454678 (8)_
v1_GRMZM2G107588_P01 4a53Zea mays3E-7619752747 (7)_
GRMZM2G107588_P01 3.21Zea mays3E-76197527411 (10)_
Zm00001eb082980_P002 agpv5Zea mays3E-7619752740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CSN8_PSD8_EIF3K(1) PCI(1)
TargetP: Cytoplasm (Class 5 C0.037; M0.032; S0.660; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 197 aa (-cTP 190)
Molecular Weight 22.55 kDA(-cTP )
PI 5.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2249Detail       seedlings [A. thaliana] total tissue gfs9
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help