PPDB

The Plant Proteome Database

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AT4G13860.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13860.2 11Arabidopsis thaliana9E-45701001000 (0)_
AT4G13850.4 11Arabidopsis thaliana5E-22775472115 (96)M
AT4G13850.3 11Arabidopsis thaliana9E-22775472116 (97)M
Os01g68790.2 7Oryza sativa8E-2178487421 (21)C
Os01g68790.3 7Oryza sativa8E-2178487410 (10)C
Os10g17454.3 7Oryza sativa4E-207554761 (1)M
Zm00001eb364750_P004 agpv5Zea mays2E-207851690 (0)M
Zm00001eb364750_P005 agpv5Zea mays3E-207851690 (0)M
Zm00001eb364750_P001 agpv5Zea mays3E-207851690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM(1) RRM_1(1) RRM_5(1)
TargetP: Cytoplasm (Class 3 C0.102; M0.281; S0.057; _0.723)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 87 aa (-cTP 72)
Molecular Weight 9.53 kDA(-cTP )
PI 4.85(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help