PPDB

 The Plant Proteome Database

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AT4G13760.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40310.1 11Arabidopsis thaliana040490950 (0)S
AT2G15470.1 11Arabidopsis thaliana040486920 (0)S
AT2G15450.1 11Arabidopsis thaliana040487920 (0)S
Os06g35320.1 7Oryza sativa9E-10237145590 (0)S
Os06g35370.1 7Oryza sativa9E-10237145590 (0)S
Os01g33300.1 7Oryza sativa5E-9638740570 (0)S
GRMZM2G030265_P01 3.21Zea mays3E-10138041611 (1)S
v1_GRMZM2G030265_P01 4a53Zea mays3E-10138041610 (0)S
Zm00001eb205940_P001 agpv5Zea mays8E-10138041610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_28(1) Pectate_lyase_3(2)
TargetP: Secreted (Class 1 C0.072; M0.030; S0.922; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 404 aa (-cTP 345)
Molecular Weight 44.21 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help