PPDB

PPDB	The Plant Proteome Database

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AT4G13710.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13710.2 11 Arabidopsis thaliana 0 470 95 95 0 (0) S
AT3G24230.1 11 Arabidopsis thaliana 0 473 71 81 0 (0) S
AT1G04680.1 11 Arabidopsis thaliana 0 394 82 89 3 (2) S
Os04g05050.1 7 Oryza sativa 0 439 75 84 0 (0) S
Os04g05050.2 7 Oryza sativa 0 373 83 91 0 (0) _
Os10g31910.1 7 Oryza sativa 0 383 62 77 0 (0) S
Zm00001eb420010_P002 agpv5 Zea mays 0 409 78 86 0 (0) C
v1_GRMZM2G412207_P02 4a53 Zea mays 0 369 84 91 0 (0) _
v1_GRMZM2G472060_P01 4a53 Zea mays 0 383 62 76 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) NosD(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 1 C0.122; M0.006; S0.967; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	470 aa (-cTP 448)
Molecular Weight	51.94 kDA(-cTP )
PI	8.43(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data