PPDB

 The Plant Proteome Database

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AT4G13710.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13710.2 11Arabidopsis thaliana047095950 (0)S
AT3G24230.1 11Arabidopsis thaliana047371810 (0)S
AT1G04680.1 11Arabidopsis thaliana039482895 (2)S
Os04g05050.1 7Oryza sativa043975840 (0)S
Os04g05050.2 7Oryza sativa037383910 (0)_
Os10g31910.1 7Oryza sativa038362770 (0)S
Zm00001eb420010_P002 agpv5Zea mays040978860 (0)C
v1_GRMZM2G412207_P02 4a53Zea mays036984910 (0)_
v1_GRMZM2G472060_P01 4a53Zea mays038362760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Beta_helix(1) NosD(1) Pectate_lyase_4(1)
TargetP: Secreted (Class 1 C0.122; M0.006; S0.967; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 470 aa (-cTP 448)
Molecular Weight 51.94 kDA(-cTP )
PI 8.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help