PPDB

PPDB	The Plant Proteome Database

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AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G16480.1 11 Arabidopsis thaliana 0 935 33 56 0 (0) M
AT2G27610.1 11 Arabidopsis thaliana 0 827 36 57 3 (3) M
AT5G09950.2 11 Arabidopsis thaliana 0 990 34 54 0 (0) M
Os12g36620.1 7 Oryza sativa 0 856 52 71 0 (0) _
Os09g07780.1 7 Oryza sativa 0 861 36 55 0 (0) M
Os01g10800.1 7 Oryza sativa 0 985 34 54 2 (2) C
v1_GRMZM2G153275_P01 4a53 Zea mays 0 896 53 71 0 (0) _
v1_GRMZM2G153275_P02 4a53 Zea mays 0 896 53 71 0 (0) _
GRMZM2G153275_P01 3.21 Zea mays 0 896 53 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) BTAD(2) DYW_deaminase(1) Mso1_Sec1_bdg(3) PPR(18) PPR_1(13) PPR_2(14) P
TargetP:	Cytoplasm (Class 5 C0.121; M0.274; S0.009; _0.283)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1064 aa (-cTP 1018)
Molecular Weight	119.74 kDA(-cTP )
PI	5.92(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data