PPDB

The Plant Proteome Database

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AT4G13620.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G22190.1 11Arabidopsis thaliana4E-379066820 (0)_
AT4G39780.1 11Arabidopsis thaliana3E-359862760 (0)_
AT1G78080.1 11Arabidopsis thaliana8E-346782940 (0)_
Os09g20350.1 7Oryza sativa6E-3211453680 (0)_
Os08g31580.1 7Oryza sativa4E-3111653670 (0)_
Os03g09170.1 7Oryza sativa6E-316481930 (0)_
GRMZM2G141679_P01 3.21Zea mays3E-3510758710 (0)_
v1_GRMZM2G141679_P01 4a53Zea mays3E-3510758710 (0)_
Zm00001eb311180_P001 agpv5Zea mays3E-3510758710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Secreted (Class 5 C0.013; M0.102; S0.377; _0.265)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 388 aa (-cTP 293)
Molecular Weight 44.25 kDA(-cTP )
PI 9.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help