PPDB

 The Plant Proteome Database

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AT4G13590.2   Uncharacterized protein family (UPF0016)
Lab Annot. manganese transporter (PAM71-HL or CMT1)
Mapman: 34.12 transport.metal
Curated Location envelope-inner (Pubmed: 29734003 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13590.1 11Arabidopsis thaliana035999995 (4)C
AT1G64150.1 11Arabidopsis thaliana4E-4721849644 (0)C
AT5G36290.2 11Arabidopsis thaliana7E-3722540590 (0)S
Os11g34180.1 7Oryza sativa1E-13634765740 (0)C
Os11g28300.1 7Oryza sativa1E-3820940610 (0)S
Os08g41670.1 7Oryza sativa5E-3621139590 (0)S
Zm00001eb088390_P004 agpv5Zea mays8E-12129868770 (0)M
Zm00001eb088390_P002 agpv5Zea mays8E-12129868770 (0)M
GRMZM2G097674_P01 3.21Zea mays8E-12129868772 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PetL(2) UPF0016(2)
TargetP: Chloroplast (Class 3 C0.708; M0.021; S0.095; _0.118)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 359 aa (-cTP 293)
Molecular Weight 37.89 kDA(-cTP 30.47)
PI 8.75(-cTP 4.77)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

 19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help