PPDB

 The Plant Proteome Database

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AT4G13460.1   SU(VAR)3-9 homolog 9
Lab Annot.
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13460.2 11Arabidopsis thaliana06501001000 (0)C
AT2G33290.3 11Arabidopsis thaliana060859750 (0)_
AT2G33290.4 11Arabidopsis thaliana060859750 (0)_
Os07g25450.1 7Oryza sativa055354700 (0)C
Os08g45130.1 7Oryza sativa3E-15352246630 (0)_
Os05g41172.1 7Oryza sativa1E-108544365513 (13)_
v1_GRMZM2G034288_P01 4a53Zea mays055053700 (0)C
Zm00001eb096860_P001 agpv5Zea mays055652690 (0)_
Zm00001eb096860_P002 agpv5Zea mays055652690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pre-SET(1) SAD_SRA(1) SET(1)
TargetP: Chloroplast (Class 3 C0.882; M0.039; S0.050; _0.301)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 650 aa (-cTP 585)
Molecular Weight 72.17 kDA(-cTP 65.25)
PI 5.12(-cTP 5.36)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help