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AT4G13360.1
ATP-dependent caseinolytic (Clp) protease/crotonase family protein
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| Lab Annot. |
CoA-thioester hydrolase CHY1 (beta-hydroxyisobutyryl-CoA hydrolase)
Mapman: 11.9.4.3 lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
ECH_1(2) ECH_2(1) |
| TargetP: |
Mitochondria (Class 5 C0.216; M0.301; S0.214; _0.048) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
421 aa (-cTP 382) |
| Molecular Weight |
46.25 kDA(-cTP ) |
| PI |
6.23(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 127 | Detail | | | | | | | | leaf [A. thaliana] | plastid thylakoid membrane | wild-type |
| 371 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 544 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) <600 kDa (LMA) | wild-type |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 1125 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2k3 |
| 1127 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2k3 |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1421 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1445 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 1) |
| 1446 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 2) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1541 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids plastoglobule | M-48 |
| 2003 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2004 | Detail | | | | | | | | leaf [A. thaliana] | WT PG plastoglobule | WT |
| 2006 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2007 | Detail | | | | | | | | leaf [A. thaliana] | WT PG plastoglobule | WT |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2011 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2015 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2029 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2030 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2077 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt & clpt1xclpt2 |
| 2080 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble | wt & clpt1xclpt2 |
| 2144 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2147 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2149 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2150 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2151 | Detail | | | | | | | | Total leaf [A. thaliana] | total soluble stroma | wt & cgep |
| 2246 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2247 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2310 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2312 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2314 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2316 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2318 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2325 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | abc1k6 |
| 2400 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1TRAPSTREP |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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15815986(seedling)
17828791(total leaf)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20601493(mitochondria (diurnal change))
20423899(chloroplast)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
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Comparative Proteomics Data
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