PPDB

 The Plant Proteome Database

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AT4G13345.1   Serinc-domain containing serine and sphingolipid biosynthesis protein
Lab Annot. Serinc-domain containing serine and sphingolipid biosynthesis protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13345.2 11Arabidopsis thaliana039499990 (0)_
AT4G13345.6 11Arabidopsis thaliana039499990 (0)_
AT4G13345.4 11Arabidopsis thaliana03781001000 (0)_
Os04g42720.1 7Oryza sativa6E-12635946660 (0)M
Os01g08460.1 7Oryza sativa5E-10835749630 (0)M
Os02g54990.2 7Oryza sativa2E-5538434510 (0)S
Zm00001eb122220_P001 agpv5Zea mays3E-15636657740 (0)_
GRMZM2G088356_P01 3.21Zea mays4E-15337257740 (0)_
v1_GRMZM2G088356_P01 4a53Zea mays4E-15337257740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ECSCR(3) Serinc(1)
TargetP: Cytoplasm (Class 2 C0.038; M0.219; S0.052; _0.975)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon: 10 TMs
TAT position:
Length 394 aa (-cTP 347)
Molecular Weight 44.98 kDA(-cTP )
PI 7.94(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help