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The Plant Proteome Database

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AT4G13340.1   Leucine-rich repeat (LRR) family protein

Lab Annot. Leucine-rich repeat (LRR) protein
Mapman: 10.5.3 cell wall.cell wall proteins.LRR
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G24480.1 11Arabidopsis thaliana048277810 (0)S
AT4G18670.1 11Arabidopsis thaliana039879884 (4)S
AT5G25550.1 11Arabidopsis thaliana3E-14834960750 (0)S
Os11g43640.1 7Oryza sativa2E-13158245570 (0)M
Os03g58110.1 7Oryza sativa2E-12932856730 (0)S
Os01g08470.1 7Oryza sativa5E-12341159730 (0)S
v1_GRMZM2G333811_P01 4a53Zea mays3E-14836857750 (0)S
GRMZM2G333811_P01 3.21Zea mays3E-14836857750 (0)S
GRMZM2G149201_P01 3.21Zea mays2E-13339757690 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Extensin_2(2) LRR_1(3) LRR_4(4) LRR_8(4) LRRNT_2(1)
TargetP: Secreted (Class 1 C0.029; M0.009; S0.945; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 760 aa (-cTP 729)
Molecular Weight 82.25 kDA(-cTP )
PI 6.49(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1535Detail       leaf [A. thaliana] wild-type
1538Detail       leaf [A. thaliana] plastid RNCs thylakoid membranewild-type
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

16287169(Cell Wall proteome)
18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help