PPDB

The Plant Proteome Database

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AT4G13270.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52330.1 11Arabidopsis thaliana2E-4620241590 (0)C
AT1G52330.2 11Arabidopsis thaliana1E-3718140590 (0)C
AT2G46150.1 11Arabidopsis thaliana7E-0822124480 (0)C
Os03g48950.2 7Oryza sativa3E-5315350730 (0)_
Os03g48950.1 7Oryza sativa4E-5315350730 (0)_
Os07g10610.1 7Oryza sativa2E-2515337560 (0)_
Zm00001eb053810_P001 agpv5Zea mays7E-5618848700 (0)_
GRMZM2G704021_P02 3.21Zea mays7E-5618848700 (0)_
v1_GRMZM2G111679_P01 4a53Zea mays1E-5415052750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1356(1) LEA_2(1) Pyr_redox_2(1)
TargetP: Chloroplast (Class 3 C0.849; M0.028; S0.007; _0.439)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 215 aa (-cTP 171)
Molecular Weight 23.99 kDA(-cTP 18.88)
PI 8.39(-cTP 6.04)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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