PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G13250.1 NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot.

chlorophyll b reductase (also named nonyellow coloring1 - NYC1)
Mapman: 19.50* tetrapyrrole synthesis.tetrapyrrole degradation

Curated Location

thylakoid (Pubmed: 23198870 22366162 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13250.2 11 Arabidopsis thaliana 0 496 99 99 0 (0) _
AT5G04900.1 11 Arabidopsis thaliana 8E-61 250 44 61 82 (71) C
AT1G24360.1 11 Arabidopsis thaliana 1E-13 209 24 48 686 (509) C
Os01g12710.1 7 Oryza sativa 0 414 75 88 0 (0) M
Os01g12710.2 7 Oryza sativa 0 400 76 89 0 (0) _
Os03g45194.1 7 Oryza sativa 9E-52 263 39 58 22 (22) C
Zm00001eb119410_P001 agpv5 Zea mays 0 414 75 88 0 (0) C
v1_GRMZM2G170013_P02 4a53 Zea mays 0 414 75 88 0 (0) C
GRMZM2G170013_P01 3.21 Zea mays 0 414 75 88 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	adh_short(1) adh_short_C2(1) KR(1) TrbC(1)
TargetP:	Cytoplasm (Class 5 C0.176; M0.307; S0.039; _0.427)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	3 TMs
TAT position:
Length	496 aa (-cTP 453)
Molecular Weight	54.84 kDA(-cTP )
PI	9.48(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21515685(GreenCut2)

Comparative Proteomics Data