PPDB

PPDB	The Plant Proteome Database

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AT4G13210.2 Pectin lyase-like superfamily protein

Lab Annot.

Mapman:

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

PeptideAtlas POGS Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13210.1 11 Arabidopsis thaliana 0 392 100 100 0 (0) _
AT3G24670.1 11 Arabidopsis thaliana 0 440 79 87 0 (0) S
AT3G07010.1 11 Arabidopsis thaliana 0 436 75 85 23 (9) S
Os04g05050.1 7 Oryza sativa 0 383 79 88 0 (0) S
Os04g05050.2 7 Oryza sativa 0 369 79 88 0 (0) _
Os10g31910.1 7 Oryza sativa 2E-175 381 61 76 0 (0) S
Zm00001eb088830_P001 agpv5 Zea mays 0 385 77 87 0 (0) S
v1_GRMZM2G412207_P02 4a53 Zea mays 0 370 78 87 0 (0) _
v1_GRMZM2G131912_P01 4a53 Zea mays 0 383 78 88 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) NosD(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 1 C0.028; M0.041; S0.957; _0.021)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	438 aa (-cTP 413)
Molecular Weight	48.55 kDA(-cTP )
PI	8.73(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data