PPDB

PPDB	The Plant Proteome Database

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AT4G13210.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13210.2 11 Arabidopsis thaliana 0 392 100 100 0 (0) S
AT3G24670.1 11 Arabidopsis thaliana 0 390 85 93 0 (0) S
AT3G07010.1 11 Arabidopsis thaliana 0 391 81 91 21 (11) S
Os04g05050.1 7 Oryza sativa 0 383 79 88 0 (0) S
Os04g05050.2 7 Oryza sativa 0 369 79 88 0 (0) _
Os10g31910.1 7 Oryza sativa 2E-175 381 61 76 0 (0) S
Zm00001eb420010_P002 agpv5 Zea mays 0 391 76 85 0 (0) C
v1_GRMZM2G412207_P02 4a53 Zea mays 0 370 78 87 0 (0) _
v1_GRMZM2G131912_P01 4a53 Zea mays 0 383 78 88 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) NosD(1) Pectate_lyase_4(1)
TargetP:	Cytoplasm (Class 3 C0.100; M0.241; S0.055; _0.827)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	401 aa (-cTP 341)
Molecular Weight	44.56 kDA(-cTP )
PI	8.84(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data