PPDB

PPDB	The Plant Proteome Database

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AT4G13100.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13100.7 11 Arabidopsis thaliana 0 259 100 100 0 (0) _
AT4G13100.9 11 Arabidopsis thaliana 0 259 100 100 0 (0) _
AT4G13100.8 11 Arabidopsis thaliana 0 259 100 100 0 (0) _
Os01g68900.1 7 Oryza sativa 5E-25 49 85 89 0 (0) _
Os08g41520.1 7 Oryza sativa 1E-19 47 78 82 0 (0) M
Os09g32730.1 7 Oryza sativa 2E-19 49 73 79 0 (0) M
v1_GRMZM2G145374_P01 4a53 Zea mays 5E-25 49 85 89 0 (0) _
Zm00001eb143400_P001 agpv5 Zea mays 5E-25 49 85 89 0 (0) _
GRMZM2G145374_P01 3.21 Zea mays 5E-25 49 85 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4_4(1) zf-rbx1(1)
TargetP:	Cytoplasm (Class 3 C0.090; M0.203; S0.005; _0.655)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	259 aa (-cTP 190)
Molecular Weight	28.89 kDA(-cTP )
PI	5.66(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data