PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G13040.3   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13040.1 11Arabidopsis thaliana9E-1722261001000 (0)M
AT4G13040.8 11Arabidopsis thaliana1E-1461961001000 (0)_
AT4G13040.4 11Arabidopsis thaliana1E-1461961001000 (0)_
Os02g29550.2 7Oryza sativa2E-388676900 (0)M
Os02g29550.1 7Oryza sativa2E-388676900 (0)M
Os02g29550.3 7Oryza sativa4E-388875890 (0)S
Zm00001eb241420_P002 agpv5Zea mays3E-4710669830 (0)M
Zm00001eb241420_P001 agpv5Zea mays3E-4710669830 (0)M
Zm00001eb241420_P003 agpv5Zea mays3E-4710669830 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) Rho_GDI(1)
TargetP: Cytoplasm (Class 5 C0.054; M0.483; S0.035; _0.651)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 246 aa (-cTP 198)
Molecular Weight 28.66 kDA(-cTP )
PI 9.66(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help