PPDB

 The Plant Proteome Database

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AT4G12650.1   Endomembrane protein 70 protein family
Lab Annot. Endomembrane protein 70 protein family
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G35160.3 11Arabidopsis thaliana066068800 (0)S
AT5G35160.4 11Arabidopsis thaliana066068800 (0)S
AT5G35160.2 11Arabidopsis thaliana066068803 (3)S
Os08g38820.2 7Oryza sativa063581900 (0)S
Os08g38820.1 7Oryza sativa063581900 (0)S
Os05g07650.1 7Oryza sativa064677894 (4)S
Zm00001eb034000_P002 agpv5Zea mays063481890 (0)S
Zm00001eb034000_P001 agpv5Zea mays063481890 (0)S
GRMZM2G113899_P01 3.21Zea mays063481893 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: EMP70(2)
TargetP: Secreted (Class 2 C0.002; M0.210; S0.915; _0.022)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon:
TAT position:
Length 652 aa (-cTP 612)
Molecular Weight 74.14 kDA(-cTP )
PI 5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1613Detail       Natural Senescence leaf [A. thaliana]  
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2252Detail       seedlings [A. thaliana] total tissue gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 14760709(Vacuolar proteome)
16618929(Golgi)
17151019(vacuole - suspension cell)
19546170(mature pollen grains)
17216043(leaf)
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
21826108(SYP trans-Golgi-filtered)
21533090(plasmodesmata-crude)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help