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PPDB	The Plant Proteome Database

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AT4G12610.1 transcription initiation factor IIF subunit alpha RAP74

Lab Annot.

transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors
Mapman: 27.2 RNA.transcription

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G12610.2 11 Arabidopsis thaliana 0 543 100 100 8 (3) C
Os10g10990.2 7 Oryza sativa 0 545 63 73 0 (0) _
Os10g10990.1 7 Oryza sativa 0 545 62 73 0 (0) _
Os10g10990.3 7 Oryza sativa 0 544 62 72 0 (0) _
Zm00001eb224360_P003 agpv5 Zea mays 0 543 60 73 0 (0) _
Zm00001eb224360_P001 agpv5 Zea mays 0 543 60 73 0 (0) _
GRMZM2G014180_P04 3.21 Zea mays 0 543 60 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1258(1) DZR(1) DZR_2(1) Hamartin(1) Ribosomal_S27e(2) TFIIF_alpha(1) zf-C3HC4
TargetP:	Chloroplast (Class 4 C0.503; M0.185; S0.042; _0.242)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	543 aa (-cTP 505)
Molecular Weight	60.06 kDA(-cTP 55.98)
PI	5.02(-cTP 4.93)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1578	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1582	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19114538(guard cells Arabidopsis leaf)
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data