PPDB

The Plant Proteome Database

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AT4G12600.1   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Lab Annot. ribosomal protein L7Ae/L30e/S12e/Gadd45 protein
Mapman: 29.2.1.2.2.57 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20160.2 11Arabidopsis thaliana2E-79160767731 (19)_
AT5G20160.1 11Arabidopsis thaliana6E-77128969631 (19)_
AT4G22380.1 11Arabidopsis thaliana9E-7712895968 (4)_
Os03g13800.1 7Oryza sativa5E-72128899631 (31)_
Os10g03540.1 7Oryza sativa9E-6312385909 (9)_
Os02g49610.1 7Oryza sativa1E-1912134530 (0)_
GRMZM5G868062_P03 3.21Zea mays1E-6912389955 (5)_
GRMZM5G868062_P02 3.21Zea mays1E-69123899579 (52)_
GRMZM5G868062_P01 3.21Zea mays1E-69123899579 (52)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PELOTA_1(1) Ribosomal_L7Ae(1)
TargetP: Cytoplasm (Class 2 C0.041; M0.141; S0.103; _0.845)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 128 aa (-cTP 73)
Molecular Weight 14.00 kDA(-cTP )
PI 6.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help