PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G12550.1 Auxin-Induced in Root cultures 1

Lab Annot.

Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G12545.1 11 Arabidopsis thaliana 5E-62 111 89 90 0 (0) S
AT4G12520.1 11 Arabidopsis thaliana 2E-34 122 50 69 0 (0) S
AT4G12510.1 11 Arabidopsis thaliana 2E-34 122 50 69 0 (0) S
Os04g46820.1 7 Oryza sativa 2E-31 131 41 62 0 (0) S
Os04g46810.1 7 Oryza sativa 4E-31 131 41 62 0 (0) S
Os03g01320.1 7 Oryza sativa 2E-30 85 63 83 0 (0) S
v1_GRMZM2G037255_P01 4a53 Zea mays 2E-32 86 61 80 93 (93) M
GRMZM2G037255_P01 3.21 Zea mays 2E-32 86 61 80 77 (72) S
Zm00001eb023070_P001 agpv5 Zea mays 2E-32 86 61 80 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Hydrophob_seed(1) LTP_2(1) Tryp_alpha_amyl(1)
TargetP:	Secreted (Class 4 C0.007; M0.217; S0.539; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	111 aa (-cTP 89)
Molecular Weight	11.62 kDA(-cTP )
PI	8.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data