PPDB

The Plant Proteome Database

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AT4G12400.1   stress-inducible protein

Lab Annot. HOP-3 (partner with HSP90)
Mapman: 29.6 protein.folding
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G12400.2 11Arabidopsis thaliana05221001008 (6)_
AT1G62740.1 11Arabidopsis thaliana0535728582 (23)_
AT1G12270.1 11Arabidopsis thaliana0536718589 (46)_
Os02g43020.1 7Oryza sativa0542668190 (90)_
Os04g45480.1 7Oryza sativa053964790 (0)_
Os06g06760.3 7Oryza sativa3E-8926355730 (0)_
v1_GRMZM2G162688_P01 4a53Zea mays0544648056 (56)_
Zm00001eb248730_P001 agpv5Zea mays054464800 (0)_
GRMZM2G162688_P01 3.21Zea mays0544648063 (57)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Alkyl_sulf_dimr(3) ANAPC3(3) BTAD(3) DUF2225(3) DUF3856(4) Fis1_TPR_C(3) HemY_N(
TargetP: Cytoplasm (Class 3 C0.193; M0.125; S0.078; _0.722)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 530 aa (-cTP 528)
Molecular Weight 60.45 kDA(-cTP )
PI 5.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

18599647(seed proteome)
18463617(suspension cells-phosphorylated proteins)
19253305(phosphoproteins (etiolated seedling))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help