PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G12390.1   pectin methylesterase inhibitor 1

Lab Annot. pectin methylesterase inhibitor 1
Mapman: 26.18 misc.invertase/pectin methylesterase inhibitor family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G62770.1 11Arabidopsis thaliana7E-7119358751 (1)S
AT5G62350.1 11Arabidopsis thaliana2E-571665074204 (96)S
AT3G47380.1 11Arabidopsis thaliana1E-5419544678 (2)S
Os06g49760.1 7Oryza sativa1E-3617543623 (3)S
Os04g01570.1 7Oryza sativa7E-3418842562 (2)S
Os08g24160.1 7Oryza sativa2E-2514937580 (0)S
GRMZM2G048430_P01 3.21Zea mays4E-3518639550 (0)S
v1_GRMZM2G048430_P01 4a53Zea mays4E-3518639550 (0)S
Zm00001eb272550_P001 agpv5Zea mays4E-3518639550 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PMEI(2)
TargetP: Secreted (Class 4 C0.146; M0.011; S0.540; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 206 aa (-cTP 151)
Molecular Weight 23.08 kDA(-cTP )
PI 9.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help