PPDB

 The Plant Proteome Database

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AT4G12300.1   cytochrome P450%2C family 706%2C subfamily A%2C polypeptide 4
Lab Annot. cytochrome P450, family 706, subfamily A, polypeptide 4
Mapman: 16.8.3 secondary metabolism.flavonoids.dihydroflavonols
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G12320.1 11Arabidopsis thaliana051884921 (1)S
AT4G12310.1 11Arabidopsis thaliana052081900 (0)S
AT4G12330.1 11Arabidopsis thaliana050259760 (0)_
Os08g43440.1 7Oryza sativa8E-17849450684 (4)S
Os01g50490.1 7Oryza sativa2E-17350847680 (0)M
Os09g08990.1 7Oryza sativa3E-11851137570 (0)S
GRMZM2G089528_P01 3.21Zea mays6E-17949551693 (3)S
Zm00001eb040180_P002 agpv5Zea mays6E-17949551690 (0)S
v1_GRMZM2G089528_P01 4a53Zea mays6E-179495516911 (11)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2999(2) p450(1) ScsC_N(2)
TargetP: Cytoplasm (Class 4 C0.046; M0.038; S0.278; _0.549)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 516 aa (-cTP 490)
Molecular Weight 58.66 kDA(-cTP )
PI 6.31(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1618Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48

* For details about the exprimental sources click here.

Published Proteomics Data

 21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help