PPDB

PPDB	The Plant Proteome Database

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AT4G12250.1 UDP-D-glucuronate 4-epimerase 5

Lab Annot.

Mapman: 10.1.6 cell wall.precursor synthesis.GAE

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G00110.1 11 Arabidopsis thaliana 0 440 74 83 0 (0) _
AT1G02000.1 11 Arabidopsis thaliana 0 436 73 83 0 (0) _
AT2G45310.1 11 Arabidopsis thaliana 0 439 70 82 0 (0) _
Os02g54890.1 7 Oryza sativa 0 429 65 77 0 (0) _
Os03g14540.1 7 Oryza sativa 0 373 73 84 0 (0) _
Os08g41440.1 7 Oryza sativa 0 370 67 80 0 (0) _
v1_GRMZM2G110558_P01 4a53 Zea mays 0 429 65 77 1 (1) _
GRMZM2G110558_P01 3.21 Zea mays 0 429 65 77 0 (0) _
Zm00001eb257590_P001 agpv5 Zea mays 0 429 65 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) adh_short(1) Epimerase(1) GDP_Man_Dehyd(1) KR(1) NAD_binding_4(2) N
TargetP:	Cytoplasm (Class 1 C0.043; M0.059; S0.005; _0.988)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	436 aa (-cTP 365)
Molecular Weight	48.16 kDA(-cTP )
PI	9.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data