PPDB

PPDB	The Plant Proteome Database

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AT4G12190.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G05350.1 11 Arabidopsis thaliana 5E-45 71 92 97 0 (0) C
AT4G12210.1 11 Arabidopsis thaliana 3E-40 71 87 91 0 (0) M
AT4G12140.1 11 Arabidopsis thaliana 6E-29 71 70 80 0 (0) _
Os02g49550.1 7 Oryza sativa 4E-12 48 45 72 0 (0) _
Os04g55510.1 7 Oryza sativa 4E-11 50 48 62 0 (0) _
Os08g38060.1 7 Oryza sativa 2E-10 52 40 65 0 (0) C
Zm00001eb068540_P002 agpv5 Zea mays 2E-11 50 46 62 0 (0) _
v1_GRMZM2G174926_P01 4a53 Zea mays 2E-11 50 46 62 0 (0) _
Zm00001eb068540_P001 agpv5 Zea mays 2E-11 50 46 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_4(1) RecR(2) RINGv(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(
TargetP:	Cytoplasm (Class 3 C0.245; M0.127; S0.096; _0.712)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	71 aa (-cTP 45)
Molecular Weight	8.20 kDA(-cTP )
PI	8.27(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data