PPDB

PPDB	The Plant Proteome Database

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AT4G12140.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G12150.1 11 Arabidopsis thaliana 3E-98 208 73 79 0 (0) C
AT4G05350.1 11 Arabidopsis thaliana 1E-57 183 54 67 0 (0) C
AT4G12210.1 11 Arabidopsis thaliana 4E-50 182 53 68 0 (0) M
Os05g47670.1 7 Oryza sativa 1E-09 71 39 61 0 (0) _
Os01g35120.1 7 Oryza sativa 2E-09 60 36 50 0 (0) _
Os12g04590.1 7 Oryza sativa 2E-08 110 27 46 0 (0) _
Zm00001eb196720_P001 agpv5 Zea mays 2E-08 48 43 54 0 (0) _
AC185126.3_FGP006 3.21 Zea mays 2E-08 48 43 54 0 (0) _
v1_AC185126.3_FGP006 4a53 Zea mays 2E-08 48 43 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(2) zf-C3HC4_3(1) zf-C3H
TargetP:	Cytoplasm (Class 5 C0.124; M0.031; S0.288; _0.437)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	202 aa (-cTP 187)
Molecular Weight	22.52 kDA(-cTP )
PI	7.13(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data