PPDB

The Plant Proteome Database

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AT4G12130.1   Glycine cleavage T-protein family

Lab Annot. COG0354 protein (Fe/S cluster formation)
Mapman: 29.8.1* protein assembly and cofactor ligation.Fe-S assembly
Curated Location mitochondria (Pubmed: 21984653 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g04380.1 7Oryza sativa5E-15638560740 (0)M
Zm00001eb377920_P001 agpv5Zea mays1E-15038057710 (0)M
GRMZM2G107665_P01 3.21Zea mays1E-15038057710 (0)M
v1_GRMZM2G107665_P01 4a53Zea mays1E-15038057710 (0)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GCV_T(1)
TargetP: Mitochondria (Class 3 C0.035; M0.818; S0.006; _0.349)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 393 aa (-cTP 332)
Molecular Weight 43.53 kDA(-cTP )
PI 6.30(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2301Detail        [A. thaliana] Clp C1 TRAP
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(contaminants cell cycle interactome (cell culture))
19508356(mature pollen grains and pollen tubes)
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help