PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G12080.1   AT-hook motif nuclear-localized protein 1

Lab Annot. AT-hook motif nuclear-localized protein 1
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
TAIR curated location: mitochondrion & nucleolus & nucleus & cytoplasm14671022,15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22770.1 11Arabidopsis thaliana3E-13036065750 (0)_
AT4G22770.2 11Arabidopsis thaliana3E-13036065750 (0)_
AT4G25320.1 11Arabidopsis thaliana1E-7624254670 (0)_
Os08g02490.1 7Oryza sativa5E-7530549640 (0)_
Os02g03270.1 7Oryza sativa2E-7222656670 (0)_
Os10g42230.2 7Oryza sativa4E-6223253680 (0)C
Zm00001eb173650_P002 agpv5Zea mays2E-6924159720 (0)_
v1_GRMZM2G062591_P02 4a53Zea mays2E-6924159721 (1)_
GRMZM2G062591_P02 3.21Zea mays2E-6924159720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PCC(1) SHMT(1)
TargetP: Cytoplasm (Class 3 C0.301; M0.063; S0.008; _0.807)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 356 aa (-cTP 279)
Molecular Weight 37.31 kDA(-cTP )
PI 9.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help