PPDB

The Plant Proteome Database

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AT4G12070.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g48640.1 7Oryza sativa7E-16343657720 (0)_
Os09g31360.1 7Oryza sativa7E-14541254710 (0)_
Os09g10950.1 7Oryza sativa2E-10926561760 (0)_
v1_GRMZM2G459110_P01 4a53Zea mays2E-16449154680 (0)_
Zm00001eb252800_P001 agpv5Zea mays2E-16449154680 (0)_
GRMZM2G459110_P01 3.21Zea mays2E-16449154680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 2 C0.134; M0.152; S0.047; _0.794)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 483 aa (-cTP 395)
Molecular Weight 53.28 kDA(-cTP )
PI 5.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1907Detail       leaf [A. thaliana] total leaf tissue Col_0
1908Detail       leaf [A. thaliana] total leaf tissue clb19_myc
1909Detail       leaf [A. thaliana] total leaf tissue Col_0
1910Detail       leaf [A. thaliana] total leaf tissue clb19_myc
1911Detail       leaf [A. thaliana] total leaf tissue Col_0

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help