PPDB

The Plant Proteome Database

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AT4G12050.1   Putative AT-hook DNA-binding family protein

Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22810.1 11Arabidopsis thaliana8E-13434479830 (0)M
AT2G45430.1 11Arabidopsis thaliana1E-7834156650 (0)M
AT3G60870.1 11Arabidopsis thaliana2E-7623063720 (0)_
Os02g25020.1 7Oryza sativa2E-8232653630 (0)_
Os06g04540.1 7Oryza sativa9E-7822661740 (0)_
Os04g50030.1 7Oryza sativa5E-6915672880 (0)_
v1_GRMZM2G105498_P01 4a53Zea mays1E-8033853620 (0)_
Zm00001eb238350_P001 agpv5Zea mays1E-8033853620 (0)_
GRMZM2G105498_P01 3.21Zea mays1E-8033853620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PCC(1) Spt20(1)
TargetP: Cytoplasm (Class 5 C0.176; M0.325; S0.016; _0.522)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 339 aa (-cTP 335)
Molecular Weight 35.78 kDA(-cTP )
PI 6.45(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help