PPDB

The Plant Proteome Database

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AT4G11860.1   FAM63A-like protein (DUF544)

Lab Annot. unknown function (DUF544)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22960.1 11Arabidopsis thaliana7E-9563035500 (0)_
AT1G56100.1 11Arabidopsis thaliana7E-124678860 (0)S
Os06g49800.1 7Oryza sativa3E-148645435913 (13)C
Os07g15440.1 7Oryza sativa3E-2918538580 (0)_
Os06g50450.1 7Oryza sativa3E-2115239550 (0)_
GRMZM2G048644_P01 3.21Zea mays1E-15162744600 (0)_
Zm00001eb272510_P002 agpv5Zea mays1E-15162744600 (0)_
v1_GRMZM2G048644_P01 4a53Zea mays1E-15162744600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MINDY_DUB(1)
TargetP: Cytoplasm (Class 3 C0.372; M0.026; S0.048; _0.836)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 682 aa (-cTP 679)
Molecular Weight 74.43 kDA(-cTP )
PI 4.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1556Detail       leaf [A. thaliana] TiO2 thylakoid membranewt

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help