PPDB

The Plant Proteome Database

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AT4G11740.1   Ubiquitin-like superfamily protein

Lab Annot. UBX-domain protein SAY1
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G11740.2 11Arabidopsis thaliana046699990 (0)_
AT4G23040.1 11Arabidopsis thaliana057462722 (0)_
AT4G00752.1 11Arabidopsis thaliana8E-5560032450 (0)_
Os08g43300.1 7Oryza sativa6E-14359948630 (0)_
Os09g35710.1 7Oryza sativa8E-140593486219 (19)_
Os09g35710.2 7Oryza sativa7E-123564466119 (19)_
Zm00001eb103170_P001 agpv5Zea mays2E-13859545610 (0)_
v1_GRMZM2G112839_P01 4a53Zea mays2E-13859545610 (0)_
GRMZM2G112839_P01 3.21Zea mays2E-13859545610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: UBA_4(2) UBX(1) UIM(2)
TargetP: Cytoplasm (Class 2 C0.043; M0.096; S0.135; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 564 aa (-cTP 548)
Molecular Weight 62.35 kDA(-cTP )
PI 4.55(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1494Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help