PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G11580.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48880.1 11Arabidopsis thaliana9E-3031226460 (0)_
AT3G48880.2 11Arabidopsis thaliana9E-3031226460 (0)_
AT3G48880.3 11Arabidopsis thaliana9E-3031226460 (0)_
Os10g35920.1 7Oryza sativa4E-2133324450 (0)_
Os02g21240.1 7Oryza sativa3E-0816227470 (0)_
Os08g09410.1 7Oryza sativa7E-0710729440 (0)_
Zm00001eb044180_P004 agpv5Zea mays1E-2033324450 (0)_
Zm00001eb044180_P001 agpv5Zea mays1E-2033324450 (0)_
GRMZM5G868683_P03 3.21Zea mays2E-2033423450 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box-like(1) LRR_1(2) LRR_4(5) LRR_6(3) LRR_8(4)
TargetP: Cytoplasm (Class 2 C0.175; M0.056; S0.094; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 333 aa (-cTP 286)
Molecular Weight 38.88 kDA(-cTP )
PI 8.27(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help