PPDB

PPDB	The Plant Proteome Database

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AT4G11360.1 RING-H2 finger A1B

Lab Annot.

RING-H2 finger A1B
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G11370.1 11 Arabidopsis thaliana 3E-90 159 81 87 0 (0) _
AT1G63840.1 11 Arabidopsis thaliana 1E-36 153 40 57 0 (0) S
AT3G61460.1 11 Arabidopsis thaliana 2E-29 158 37 58 0 (0) S
Os04g49000.1 7 Oryza sativa 2E-15 93 38 58 0 (0) S
Os02g35144.1 7 Oryza sativa 5E-14 97 36 53 0 (0) _
Os02g45710.1 7 Oryza sativa 5E-13 77 41 55 0 (0) S
v1_GRMZM2G318408_P01 4a53 Zea mays 1E-15 79 44 64 0 (0) S
GRMZM2G318408_P01 3.21 Zea mays 1E-15 79 44 64 0 (0) S
Zm00001eb243920_P001 agpv5 Zea mays 3E-14 112 33 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(2) Prok-RING_1(2) Prok-RING_4(1) Rad50_zn_hook(2) RINGv(1) Rtf2(1) zf-AN
TargetP:	Cytoplasm (Class 4 C0.036; M0.178; S0.108; _0.564)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	157 aa (-cTP 96)
Molecular Weight	18.00 kDA(-cTP )
PI	4.88(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
16502469(cell suspension-Cd-up)

Comparative Proteomics Data