PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G11120.1   translation elongation factor Ts (EF-Ts)

Lab Annot. translation elongation factor Ts (EF-Ts), putative
Mapman: 29.2.4 protein.synthesis.elongation
Curated Location
TAIR curated location: mitochondrion14671022,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29060.1 11Arabidopsis thaliana1E-1610544611525 (918)C
AT4G29060.2 11Arabidopsis thaliana3E-151783250490 (280)C
Os08g30884.1 6Oryza sativa8E-16438359776 (6)M
Os08g25290.1 7Oryza sativa4E-186358820 (0)_
Os12g35630.1 7Oryza sativa1E-16191334960 (60)C
GRMZM2G095534_P03 3.21Zea mays1E-165390607965 (18)M
GRMZM2G095534_P01 3.21Zea mays1E-165390607965 (18)M
v1_GRMZM2G095534_P05 4a53Zea mays1E-165390607915 (14)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: EF_TS(1) JHD(1) THOC7(2)
TargetP: Mitochondria (Class 3 C0.125; M0.541; S0.007; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 395 aa (-cTP 334)
Molecular Weight 43.19 kDA(-cTP )
PI 6.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help