PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G10940.1   RING/U-box protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.10)
Links TAIR   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10930.2 11Arabidopsis thaliana5E-1311841001000 (0)_
AT4G10930.1 11Arabidopsis thaliana5E-1311841001000 (0)_
AT3G05670.1 11Arabidopsis thaliana2E-1115630420 (0)_
Os12g10700.1 7Oryza sativa7E-4713758700 (0)_
Os03g19020.3 7Oryza sativa6E-1817534450 (0)_
Os03g19020.1 7Oryza sativa6E-1817534450 (0)_
v1_GRMZM2G391413_P01 4a53Zea mays2E-5916057681 (1)C
GRMZM2G391413_P01 3.21Zea mays2E-5916057680 (0)C
v1_GRMZM2G391413_P02 4a53Zea mays1E-5816057681 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PHD(1) zf-C3HC4(1) zf-MIZ(1)
TargetP: Cytoplasm (Class 2 C0.065; M0.075; S0.167; _0.897)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 192 aa (-cTP 180)
Molecular Weight 21.72 kDA(-cTP )
PI 3.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help