PPDB

 The Plant Proteome Database

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AT4G10890.1   DDE family endonuclease
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10890.2 11Arabidopsis thaliana05271001000 (0)_
AT4G10890.3 11Arabidopsis thaliana05271001000 (0)_
AT3G30525.1 11Arabidopsis thaliana7E-219450620 (0)_
Os06g38920.1 7Oryza sativa4E-189048640 (0)M
Os09g26280.1 7Oryza sativa4E-189746610 (0)M
Os08g39260.1 7Oryza sativa8E-189048640 (0)M
Zm00001eb050270_P001 agpv5Zea mays2E-139543560 (0)S
v1_GRMZM2G386337_P01 4a53Zea mays3E-099332530 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DDE_Tnp_4(1) DUF2439(1) PqqD(2)
TargetP: Cytoplasm (Class 3 C0.023; M0.234; S0.155; _0.799)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 527 aa (-cTP 448)
Molecular Weight 60.02 kDA(-cTP )
PI 9.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help