PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G10610.1   CTC-interacting domain 12
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10610.2 11Arabidopsis thaliana03171001000 (0)_
AT1G32790.1 11Arabidopsis thaliana9E-16733074810 (0)C
AT1G32790.2 11Arabidopsis thaliana5E-15731374810 (0)C
Os08g02330.1 7Oryza sativa4E-13929169790 (0)_
Os01g11120.1 7Oryza sativa5E-11328459701 (1)_
Os06g35030.3 7Oryza sativa5E-10331554660 (0)S
GRMZM2G173428_P01 3.21Zea mays7E-14029768761 (1)_
v1_GRMZM2G173428_P01 4a53Zea mays7E-14029768760 (0)_
Zm00001eb260870_P005 agpv5Zea mays4E-13929468760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PAM2(1) Phage_coat(2) RRM_1(2)
TargetP: Cytoplasm (Class 5 C0.463; M0.040; S0.173; _0.482)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 336 aa (-cTP 328)
Molecular Weight 36.78 kDA(-cTP )
PI 7.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help