PPDB

 The Plant Proteome Database

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AT4G10360.1   TRAM%2C LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10360.3 11Arabidopsis thaliana02661001000 (0)_
AT4G10360.2 11Arabidopsis thaliana02661001002 (2)_
AT1G31300.3 11Arabidopsis thaliana2E-8523852700 (0)_
Os05g40700.1 7Oryza sativa9E-10626055730 (0)_
Os01g60120.2 7Oryza sativa2E-10425456740 (0)_
Os01g60120.3 7Oryza sativa2E-10425456740 (0)_
Zm00001eb149750_P005 agpv5Zea mays1E-9725351710 (0)_
GRMZM2G021589_P05 3.21Zea mays1E-9725351710 (0)_
v1_GRMZM2G021589_P05 4a53Zea mays1E-9725351710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: TRAM_LAG1_CLN8(1)
TargetP: Cytoplasm (Class 3 C0.008; M0.079; S0.197; _0.766)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 266 aa (-cTP 244)
Molecular Weight 30.21 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help