PPDB

PPDB	The Plant Proteome Database

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AT4G10160.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G10150.1 11 Arabidopsis thaliana 2E-134 225 83 87 0 (0) _
AT1G33480.1 11 Arabidopsis thaliana 4E-62 256 43 58 0 (0) _
AT1G35330.1 11 Arabidopsis thaliana 3E-18 153 31 48 0 (0) S
Os02g35144.1 7 Oryza sativa 9E-38 232 38 55 0 (0) _
Os11g02424.1 7 Oryza sativa 2E-18 131 32 53 0 (0) C
Os02g45390.1 7 Oryza sativa 6E-18 134 35 49 0 (0) S
Zm00001eb243920_P001 agpv5 Zea mays 1E-35 162 42 64 0 (0) _
v1_GRMZM2G108085_P01 4a53 Zea mays 1E-35 162 42 64 0 (0) _
GRMZM2G108085_P01 3.21 Zea mays 1E-35 162 42 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) Chordopox_A13L(1) DUF1272(1) DUF4519(1) FANCL_C(1) Orf78(1) PHD(1
TargetP:	Cytoplasm (Class 3 C0.090; M0.154; S0.080; _0.745)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	225 aa (-cTP 213)
Molecular Weight	24.87 kDA(-cTP )
PI	4.55(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data