PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G10150.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G10160.1 11 Arabidopsis thaliana 3E-134 225 83 87 0 (0) _
AT1G33480.1 11 Arabidopsis thaliana 5E-76 272 51 64 0 (0) _
AT4G24015.1 11 Arabidopsis thaliana 1E-28 154 40 64 0 (0) _
Os02g35144.1 7 Oryza sativa 1E-45 238 41 56 0 (0) _
Os01g61470.1 7 Oryza sativa 7E-18 130 31 50 0 (0) _
Os02g45390.1 7 Oryza sativa 1E-17 78 48 65 0 (0) S
Zm00001eb243920_P001 agpv5 Zea mays 7E-45 166 48 65 0 (0) _
v1_GRMZM2G108085_P01 4a53 Zea mays 7E-45 166 48 65 0 (0) _
GRMZM2G108085_P01 3.21 Zea mays 7E-45 166 48 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Lung_7-TM_R(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC
TargetP:	Cytoplasm (Class 1 C0.121; M0.039; S0.052; _0.970)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	236 aa (-cTP 171)
Molecular Weight	26.16 kDA(-cTP )
PI	4.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data