PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G10100.1   co-factor for nitrate%2C reductase and xanthine dehydrogenase 7
Lab Annot. co-factor for nitrate, reductase and xanthine dehydrogenase 7
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G10100.2 11Arabidopsis thaliana5E-65961001001 (1)_
AT4G10100.3 11Arabidopsis thaliana5E-65961001001 (1)_
Os02g35200.1 7Oryza sativa1E-247657721 (1)C
Zm00001eb244080_P003 agpv5Zea mays3E-307962750 (0)M
v1_GRMZM2G121468_P02 4a53Zea mays3E-307962751 (1)_
v1_GRMZM2G121468_P01 4a53Zea mays3E-307962751 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ThiS(1)
TargetP: Cytoplasm (Class 3 C0.254; M0.139; S0.076; _0.751)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 96 aa (-cTP 71)
Molecular Weight 10.53 kDA(-cTP )
PI 4.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help