PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G10020.1 hydroxysteroid dehydrogenase 5

Lab Annot.

Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G50600.1 11 Arabidopsis thaliana 4E-89 343 42 60 49 (38) S
AT5G50700.1 11 Arabidopsis thaliana 4E-89 343 42 60 49 (38) S
AT3G47350.1 11 Arabidopsis thaliana 2E-74 302 39 61 0 (0) S
Os03g62590.1 7 Oryza sativa 1E-154 307 65 82 0 (0) S
Os12g27830.1 7 Oryza sativa 9E-87 311 45 63 0 (0) S
Os04g32070.1 7 Oryza sativa 6E-82 301 43 62 1 (1) _
AC217358.3_FGP007 3.21 Zea mays 3E-89 200 64 80 0 (0) _
v1_AC217358.3_FGP007 4a53 Zea mays 3E-89 200 64 80 0 (0) _
GRMZM2G006119_P01 3.21 Zea mays 7E-86 320 43 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	adh_short(1) adh_short_C2(1) Epimerase(2) KR(1) Polysacc_synt_2(1)
TargetP:	Secreted (Class 2 C0.004; M0.110; S0.954; _0.207)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	389 aa (-cTP 374)
Molecular Weight	43.44 kDA(-cTP )
PI	6.41(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
19562800(oil body mature seeds (Brassica napus))
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data