PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G09820.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G63650.1 11Arabidopsis thaliana5E-8959133510 (0)_
AT1G63650.2 11Arabidopsis thaliana5E-8959133510 (0)_
AT1G63650.3 11Arabidopsis thaliana5E-8959133510 (0)_
Os04g47040.1 7Oryza sativa1E-8453833500 (0)_
Os04g47080.1 7Oryza sativa3E-7156531480 (0)M
Os07g11020.1 7Oryza sativa3E-6821854670 (0)M
Zm00001eb303250_P003 agpv5Zea mays8E-11366235480 (0)M
v1_GRMZM2G042733_P01 4a53Zea mays6E-7122950640 (0)M
GRMZM2G042733_P01 3.21Zea mays6E-6622948620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ACT_4(1) bHLH-MYC_N(2) HGD-D(2) HLH(1)
TargetP: Cytoplasm (Class 2 C0.099; M0.187; S0.033; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 518 aa (-cTP 447)
Molecular Weight 59.20 kDA(-cTP )
PI 5.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help