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AT4G09580.1 SNARE associated Golgi protein family

Lab Annot.

SNARE associated Golgi protein family
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G71940.1 11 Arabidopsis thaliana 3E-155 274 76 89 0 (0) _
AT1G71940.2 11 Arabidopsis thaliana 6E-142 253 75 88 0 (0) _
AT4G17790.1 11 Arabidopsis thaliana 2E-107 237 61 81 0 (0) _
Os03g49700.1 7 Oryza sativa 2E-127 268 65 82 0 (0) _
Os02g46660.1 7 Oryza sativa 1E-104 241 60 80 0 (0) S
Os04g50216.1 7 Oryza sativa 7E-104 244 60 79 0 (0) S
GRMZM2G153706_P01 3.21 Zea mays 4E-128 267 67 82 0 (0) _
Zm00001eb054370_P001 agpv5 Zea mays 4E-128 267 67 82 0 (0) _
v1_GRMZM2G153706_P01 4a53 Zea mays 4E-128 267 67 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	SNARE_assoc(2)
TargetP:	Cytoplasm (Class 3 C0.157; M0.169; S0.015; _0.759)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	6 TMs
TAT position:
Length	287 aa (-cTP 214)
Molecular Weight	32.14 kDA(-cTP )
PI	9.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1542	Detail								leaf [A. thaliana]		wild-type
1999	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2208	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 strepII
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st
2226	Detail								leaf [A. thaliana]	total leaf tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
18463617(suspension cells-phosphorylated proteins)
19888209(80S polysomal fraction)
19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data