PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G09120.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G09130.1 11 Arabidopsis thaliana 1E-152 366 65 75 0 (0) S
AT4G09110.1 11 Arabidopsis thaliana 3E-133 347 61 70 0 (0) S
AT1G35330.1 11 Arabidopsis thaliana 4E-85 358 46 57 0 (0) S
Os02g52210.1 7 Oryza sativa 6E-34 271 34 49 0 (0) M
Os02g52210.2 7 Oryza sativa 6E-34 271 34 49 0 (0) M
Os09g29310.1 7 Oryza sativa 4E-32 153 45 57 0 (0) S
Zm00001eb255510_P001 agpv5 Zea mays 9E-41 315 33 50 0 (0) S
v1_GRMZM2G323013_P02 4a53 Zea mays 9E-41 315 33 50 0 (0) S
GRMZM2G323013_P02 3.21 Zea mays 9E-41 315 33 50 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) Tmpp129(2) YacG(2) zf-ANAPC11(
TargetP:	Secreted (Class 5 C0.001; M0.484; S0.600; _0.028)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	345 aa (-cTP 334)
Molecular Weight	38.80 kDA(-cTP )
PI	8.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data