PPDB

The Plant Proteome Database

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AT4G09110.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G09120.1 11Arabidopsis thaliana1E-13434761700 (0)S
AT4G09130.1 11Arabidopsis thaliana8E-12435956630 (0)S
AT1G35330.1 11Arabidopsis thaliana2E-4517348610 (0)S
Os09g29310.1 7Oryza sativa1E-2815539530 (0)S
Os08g37760.1 7Oryza sativa5E-288557710 (0)M
Os03g27360.1 7Oryza sativa1E-2717333520 (0)S
GRMZM2G082653_P01 3.21Zea mays2E-3315639561 (1)_
Zm00001eb315600_P001 agpv5Zea mays2E-3315639560 (0)_
v1_GRMZM2G082653_P01 4a53Zea mays2E-3315639560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) YacG(2) zf-ANAPC11(1) z
TargetP: Secreted (Class 2 C0.003; M0.096; S0.780; _0.158)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 302 aa (-cTP 226)
Molecular Weight 34.32 kDA(-cTP )
PI 7.07(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help