PPDB

PPDB	The Plant Proteome Database

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AT4G09100.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G35000.1 11 Arabidopsis thaliana 2E-33 127 50 62 0 (0) S
AT1G35330.1 11 Arabidopsis thaliana 2E-32 82 58 78 0 (0) S
AT1G72200.1 11 Arabidopsis thaliana 8E-32 118 45 61 0 (0) _
Os09g29310.1 7 Oryza sativa 6E-27 127 42 57 0 (0) S
Os08g37760.1 7 Oryza sativa 4E-25 79 53 68 0 (0) M
Os02g52210.2 7 Oryza sativa 9E-24 138 39 53 0 (0) M
Zm00001eb101180_P001 agpv5 Zea mays 7E-29 133 42 55 0 (0) S
GRMZM2G015753_P01 3.21 Zea mays 7E-29 133 42 55 0 (0) S
v1_GRMZM2G015753_P01 4a53 Zea mays 7E-29 133 42 55 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3H2C3
TargetP:	Secreted (Class 2 C0.004; M0.091; S0.865; _0.143)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	132 aa (-cTP 96)
Molecular Weight	14.89 kDA(-cTP )
PI	6.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data